CDS

Accession Number TCMCG042C64552
gbkey CDS
Protein Id XP_016496688.1
Location complement(join(24248..24322,24492..24554,24649..24711,25343..25448,25583..25677,25773..25802,27043..27114,28013..28072,29308..29354,29494..29558,29802..29890,29980..30018,30135..30194,30554..30626,31283..31464,32185..32265,33790..33921,34108..34208,35355..35478,36623..36758,37412..37601,37928..38016,38709..38829,39157..39276,39375..39405))
Gene LOC107815595
GeneID 107815595
Organism Nicotiana tabacum

Protein

Length 747aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016641202.1
Definition PREDICTED: U3 small nucleolar RNA-associated protein 25-like [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category K
Description Utp25, U3 small nucleolar RNA-associated SSU processome protein 25
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14774        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000462        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034511        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGCAACCAGCGATTTGGTAGAAAACGAGGCATGAAGAGAAGAGTTGAACAGAAACCGTTTACAAAGAACCAGAATATGATGAAGAAGAAGAATGGTCGATTTGGTAGAGAAGAAAAGCTCAATAGAAGCCCCTCTCCAAGTGTCTCAGATGATTCAGGAGAAGAAAACTCGGAGATAGAAGAAGTTGAAGCACAAAAGGAACAAGAAGAAGAAGAAGTTTTGAATTATAAGGAGCCAACAATGTATGACAGTTTGTTGGAGTCATTGAGGACAAAACGAGAAGAATATAACTCGGACTCAGAAGAAAATGAAGATGATGTTGAGCAAGCTCATGGTGCGTCTGGTGATGAAAATGAAGGCAGTGATAGTGAGGCTTCTAGACTTAGCGAACCTGGTGCTAGTCTAAATGGAGGTGGTCTAGGTAACCCCGTGGGACAGGTTGGAGGTACCGAAACTGACGATGATGATTCGGAGGCCTCTGGTTCAGATGAAGAACAGGAATTGAGAGTAAATGGTCAACCTACCAAAGGGGCTTGTGCAAGCACGAGCTCATTTCACTCTCATTTGGATCACAAGTTATCCAAAGAAGAGGTTGACATGCTACAGAAAAAGAAATGGACTTGCAAATGGGTGGTAGCGATGTCAAATTGCAAGTGGAGAGGGACAGGCGAGTGTTTTCTGAAGGAGCTAGACGGCTTCTTATTTCATGGCTTGAAGCCGGCACTATACAAGCATTGGTTAGGTATCTATGAGAAGTCTGGAGGCTCCGATTTTGCTTCATCAAAGCAGATATTATTTTTCTCCCTCTGCAACAGCTACCGGGATATTTTGCACCACAACAAGAAACCCTTCTATCTCAAAGGTCTAGAAGAAGATTCAAGTACCATGGATGCTTATGTTATGCATTCTCTTAATCATATATTCAGAACTAGGGATCTTGTAAAGAAGAACGAGGCGAAAATAACTAAGCTTCCGGAGAGTGTGAAAGCAGATACCCTTACTAATGAAGCTTTTCTTGACCGGGGGTTTACTCGCCCCAAGGTTCTGATCATTCTCCCTCTAGCAAGTGTTGCATTTCGAGTAGTCAAGCGGCTGATTGATTTGACACCTCCTAAATACAAGTCTAATGTAGAGGAGCGTGAACGTTTCTATAGAGAATTCGGGGCCGGAGTAAGCAAAGATAGGGAGGATGAAGATGCCGTCGAAAGCTCTGAATCAAAGAAGAGCTCAAAACCATCTGATTTTCAAGCATTATTTGGGGGAAATAACAATGATCACTTCATGCTAGGAATTAAGTTCACTAGGAGGAGCATAAAGTTGTACGGTGACTTTTACTCGTCAGACATGATTGTTGCTTCCCCTCTTGGCCTAATCACTAAAATTGGGGAGGCAGAAATGTTTAAGGAAAAAAATGTTGATTATCTTTCTTCTATAGAGGTTCTAATTGTTGACCACGCAGATGTCATATTGATGCAGAATTGGTCACACGTGAATACAATTGTTGAACAATTAAATCGGATACCCTGCGAGCAGCATGGAACAGATATTATGCGCATTAGGCAGTGGTATTTAGACGGTCAAGCACCATTCTACCGCCAATCCATAATCTTATCTTCTCATATAAATCCAGACATCAATGGTTTATTCAACCATCATTGCCTCAACCATGAAGGAAAGGTTAAATTGGCAAGCGAGTATAAAGGTGTTTTACCCAAGGTAGTACTTCAAATACGGCAGATTTATGAGCGTTTTGATGCGAAAACTGCAGAAGATGCTGATGATGCTCGGTTTGATTATTTCACAAAAAAGGTGTTCCCCAAGATAAAGGATTCCATTCAGGGTGGTATAATGCTATTTATTAGCTCTTACTTTGAGTTCATTCGAGTAAGGAACTTCTTGAAGTCACAAGAGGCATCCTGTTGTCTGTTGGGGGAGTACACTGAGCAGAGTGATATATCTCGTGCACGAGTGTGGTTTTTCAACGGAACAAAAAAAATTATGCTTTACACTGAAAGAGCTCACTTCTATCATCGATACAAGATACGTGGCATGCAGAACTTGATCATATATTCACTTCCAGAGCGGAAAGAATTTTACCCAGAGGTTGTAAACATGCTACAAGGGTCTGCTTGCACTGTTCTATTTTCTCGTTTTGACCAGCTTCGGCTTGAGAGGATTGTTGGCACTGCTGCTGCAAAAAGGATGATCACATCGGACAAGGGTGTTTTTGTCTTCTGTTAA
Protein:  
MGNQRFGRKRGMKRRVEQKPFTKNQNMMKKKNGRFGREEKLNRSPSPSVSDDSGEENSEIEEVEAQKEQEEEEVLNYKEPTMYDSLLESLRTKREEYNSDSEENEDDVEQAHGASGDENEGSDSEASRLSEPGASLNGGGLGNPVGQVGGTETDDDDSEASGSDEEQELRVNGQPTKGACASTSSFHSHLDHKLSKEEVDMLQKKKWTCKWVVAMSNCKWRGTGECFLKELDGFLFHGLKPALYKHWLGIYEKSGGSDFASSKQILFFSLCNSYRDILHHNKKPFYLKGLEEDSSTMDAYVMHSLNHIFRTRDLVKKNEAKITKLPESVKADTLTNEAFLDRGFTRPKVLIILPLASVAFRVVKRLIDLTPPKYKSNVEERERFYREFGAGVSKDREDEDAVESSESKKSSKPSDFQALFGGNNNDHFMLGIKFTRRSIKLYGDFYSSDMIVASPLGLITKIGEAEMFKEKNVDYLSSIEVLIVDHADVILMQNWSHVNTIVEQLNRIPCEQHGTDIMRIRQWYLDGQAPFYRQSIILSSHINPDINGLFNHHCLNHEGKVKLASEYKGVLPKVVLQIRQIYERFDAKTAEDADDARFDYFTKKVFPKIKDSIQGGIMLFISSYFEFIRVRNFLKSQEASCCLLGEYTEQSDISRARVWFFNGTKKIMLYTERAHFYHRYKIRGMQNLIIYSLPERKEFYPEVVNMLQGSACTVLFSRFDQLRLERIVGTAAAKRMITSDKGVFVFC